Fitness data for PP_5556 in Pseudomonas putida KT2440

putative bacteriophage lysis protein
SEED: FIG00959768: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.6 -2.3 compare
pH pH 9 -1.6 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.4 -1.6 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -1.2 -2.4 compare
stress Butyrolactam 2 vol% -1.1 -2.9 compare
carbon source ferulate (C); with MOPS -1.1 -1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.0 -1.4 compare
phage P. put South MOI 10 -1.0 -1.3 compare
pH Growth at pH6 and (C) D-Glucose -1.0 -1.2 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.9 -3.1 compare
time series Timeseries; NC condition; Bioreplicate 1; Time 4hrs; Measurement -0.9 -3.4 compare
pH Growth at pH8 and (C) D-Glucose +0.9 +2.2 compare
carbon source Hexanoic (C) +0.9 +3.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.9 +2.0 compare
no stress control Growth with no stress +0.9 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.9 +2.0 compare
carbon source ferulate (C); with MOPS +1.0 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +1.1 +2.5 compare
nitrogen source NAG (N); with MOPS +1.2 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.5 +1.9 compare