Fitness data for PP_5547 in Pseudomonas putida KT2440

protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source carbon source D-Glucose 55.5 mM -1.3 -3.3 compare
carbon source L-Leucine (C) -1.3 -1.9 compare
nitrogen source 2,6-diaminopimelic (N) -1.3 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -1.6 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.8 -2.6 compare
nitrogen source 2,6-diaminopimelic (N) -0.7 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.7 -1.4 compare
no phage control Time6-nophage -0.6 -2.1 compare
carbon source carbon source Bisabolol 45 mM -0.6 -2.0 compare
stress 2-Piperidinone 3 vol% +0.6 +2.3 compare
pH Growth at pH6 and (C) D-Glucose +0.7 +1.9 compare
temperature Growth at 25C; with MOPS +0.7 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.7 +2.3 compare
nitrogen source nitrogen source nitrate 5mM +0.7 +2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +2.2 compare
nitrogen source no extra (N); with MOPS +0.7 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.8 +1.9 compare
phage P. putida Sci small MOI 0.1 +0.9 +2.5 compare