Fitness data for PP_5539 in Pseudomonas putida KT2440

conserved exported protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -1.0 -2.4 compare
phage P. putida PUT 7 MOI 1 -0.6 -1.9 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -0.5 -2.7 compare
phage P. putida Sci small MOI 0.1 -0.5 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.5 -2.7 compare
carbon source L-Proline (C) -0.5 -2.5 compare
carbon source L-Lysine 10 mM (C) -0.4 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -2.3 compare
phage PUT 8 MOI 1 -0.4 -1.4 compare
carbon source L-tyrosine 5 mM (C) -0.4 -2.4 compare
phage PUT8 MOI 0.1 -0.3 -1.7 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.3 -1.8 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.3 +2.1 compare
temperature shift Temperature shift 10_to_30 +0.3 +2.3 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.4 +1.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.5 compare
carbon source butyrate (C) +0.4 +2.5 compare
nitrogen source Ammonium chloride (N) +0.4 +2.2 compare
nitrogen source nitrogen source nitrite 0.5mM +0.4 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +2.2 compare