Fitness data for PP_5533 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.0)


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group condition fitness t score  
temperature shift Temperature shift 10_to_25; with MOPS -5.9 -1.4 compare
carbon source Tween 20 (C) -5.3 -1.1 compare
phage P. putida Sci small MOI 0.1 -5.3 -1.0 compare
carbon source Tween 20 (C) -5.3 -1.2 compare
phage P. putida Sci small MOI 0.1 -4.9 -1.1 compare
pH Growth at pH7 and (C) Trisodium citrate -3.6 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -3.1 -1.7 compare
carbon source ferulate (C); with MOPS -3.1 -1.3 compare
phage P. putida South MOI 10 -3.0 -1.9 compare
temperature shift Temperature shift 30_to_25 -2.7 -1.6 compare
nitrogen source Urea (N); with MOPS -2.6 -1.5 compare
carbon source ferulate (C); with MOPS -2.4 -1.2 compare
pH pH 7 -2.3 -1.2 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -2.3 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.2 -1.4 compare
pH Growth at pH7 and (C) D-Glucose -2.1 -1.4 compare
phage P. putida Sci Big MOI 0.1 -2.0 -1.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.0 -1.5 compare
nitrogen source NAG (N) -2.0 -1.9 compare
microaerobic m9 microaerobic M9 -2.0 -2.0 compare