Fitness data for PP_5490 in Pseudomonas putida KT2440

site-specific DNA recombinase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
temperature shift Temperature shift 10_to_30; with MOPS -1.3 -3.5 compare
carbon source D-Glucose (C) -0.9 -1.8 compare
nitrogen source NAG (N); with MOPS -0.8 -1.5 compare
carbon source 1,3-Butandiol (C) -0.7 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.7 -1.4 compare
pH Growth at pH7 and (C) D-Glucose -0.7 -1.4 compare
carbon source Octanoic (C) -0.7 -2.5 compare
nitrogen source Ammonium chloride (N) -0.6 -2.0 compare
carbon source Valeric (C) -0.6 -2.6 compare
carbon source Delta-Decalactone (C) +0.6 +2.4 compare
phage PUT8 MOI 10 +0.7 +3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.7 +3.5 compare
phage P. putida Missley MOI 0.1 +0.7 +2.6 compare
phage PUT8 MOI 0.1 +0.7 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.8 compare
carbon source Myristic (C) +0.8 +2.3 compare
phage PUT8 MOI 0.1 +0.9 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.9 compare
phage P. putida Sci small MOI 0.1 +1.0 +2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +2.9 compare