Fitness data for PP_5446 in Pseudomonas putida KT2440

protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -1.6 -1.8 compare
pH Growth at pH7 and (C) Trisodium citrate -1.1 -1.8 compare
temperature Growth at 30C; with MOPS -0.9 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -1.8 compare
supernatant Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x and Ferric chloride 1 uM -0.7 -3.2 compare
pH Valerolactone (C) pH 6.5 -0.7 -2.3 compare
temperature Growth at 30C -0.7 -2.0 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -1.4 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.6 -1.9 compare
nitrogen source Urea (N) +0.6 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.7 +1.6 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.7 +2.8 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.7 +3.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.8 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.7 +2.1 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.8 +3.3 compare
stress Growth with Chloride 200 mM +0.8 +2.7 compare
pH pH 8 +0.9 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +2.0 compare