Fitness data for PP_5388 in Pseudomonas putida KT2440

probable exported copper efflux protein
SEED: Cation efflux system protein CusF precursor
KEGG: Cu(I)/Ag(I) efflux system periplasmic protein CusF

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.2 -1.3 compare
pH Growth at pH8 and (C) D-Glucose -1.0 -1.6 compare
pH Growth at pH7 and (C) D-Glucose -0.9 -1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -2.9 compare
carbon source Hexanoic (C) -0.9 -2.4 compare
carbon source Tween 20 (C) -0.9 -1.8 compare
pH Valerolactone (C) pH 6.5 -0.9 -1.7 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Cys -0.8 -2.8 compare
stress MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL -0.8 -3.4 compare
pH pH 7 -0.8 -1.5 compare
nitrogen source nitrate (N) -0.8 -1.4 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.7 +1.4 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.8 +1.6 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. +0.8 +2.6 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay +0.8 +2.6 compare
stress Growth with Chloride 500 mM +0.8 +3.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.9 +3.3 compare
phage P. putida Missley MOI 0.1 +0.9 +5.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 +2.0 compare
nitrogen source 2,6-diaminopimelic (N) +1.1 +2.8 compare