Fitness data for PP_5381 in Pseudomonas putida KT2440

hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. -1.2 -2.6 compare
nitrogen source nitrite (N) -1.2 -1.8 compare
carbon source 4-Methyl-2-oxopentanoic (C) -1.2 -3.3 compare
temperature shift Temperature shift 10_to_30; with MOPS -1.1 -2.0 compare
nitrogen source no extra (N); with MOPS -1.1 -1.9 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -2.2 compare
pH Growth at pH7 and (C) D-Glucose -0.9 -1.1 compare
carbon source 5-Aminovaleric 10 mM (C) -0.9 -1.5 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.9 -2.2 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.9 -1.9 compare
temperature Growth at 30C -0.9 -1.2 compare
phage P. putida Missley MOI 0.1 +0.8 +2.6 compare
no stress control Growth with no stress +0.9 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.9 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.9 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +1.0 +3.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.0 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.0 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.0 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.3 +3.3 compare