Fitness data for PP_5294 in Pseudomonas putida KT2440

Ribonuclease PH
SEED: Ribonuclease PH (EC 2.7.7.56)
KEGG: ribonuclease PH

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)


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group condition fitness t score  
carbon source ferulate (C); with MOPS -2.1 -5.1 compare
carbon source ferulate (C); with MOPS -2.0 -4.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.8 -3.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.7 -3.7 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.6 -4.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.4 -5.8 compare
carbon source Levulinic Acid (C) -1.4 -6.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.4 -3.9 compare
carbon source Levulinic Acid (C) -1.4 -6.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.4 -4.3 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.4 -4.9 compare
phage P. putida PUT10 MOI 1 +1.4 +8.3 compare
phage P. putida PUT10 MOI 10 +1.4 +8.4 compare
phage P. put South MOI 1 +1.4 +7.7 compare
phage P. putida South MOI 0.1 +1.5 +7.4 compare
phage P. put PUT 10 MOI 10 +1.5 +8.4 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +1.6 +7.2 compare
phage P. putida South MOI 0.1 +1.7 +10.5 compare
phage P. putida South MOI 1 +1.7 +11.5 compare
phage P. putida PUT10 MOI 10 +1.7 +12.5 compare