Fitness data for PP_5275 in Pseudomonas putida KT2440

putative regulator
SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.5 compare
carbon source L-Glutamine (C) -0.5 -3.7 compare
nitrogen source 2,6-diaminopimelic (N) -0.5 -2.0 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.4 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.9 compare
nitrogen source Propandiamine (N) -0.4 -2.6 compare
stress Growth with Chloride 200 mM; with MOPS -0.4 -1.8 compare
phage P. putida Missley MOI 0.1 -0.4 -1.8 compare
pH Growth at pH6 and (C) Trisodium citrate -0.4 -1.6 compare
pH Growth at pH6 and (C) Trisodium citrate -0.4 -1.8 compare
pH Growth at pH7 and (C) Trisodium citrate -0.3 -1.5 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.6 compare
pH Growth at pH6 and (C) Trisodium citrate +0.3 +1.8 compare
nitrogen source Propiolactam (N) +0.3 +2.0 compare
pH pH 4 +0.3 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.3 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.6 compare
carbon source carbon source D-Glucose 55.5 mM +0.5 +2.2 compare