Fitness data for PP_5268 in Pseudomonas putida KT2440

DNA-binding transcriptional repressor PuuR-putrescine
SEED: Transcriptional regulator, MerR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
pH Growth at pH6 and (C) Trisodium citrate -1.1 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.8 -2.1 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.8 -3.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8 -2.1 compare
pH pH 5 -0.7 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.5 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.7 -2.2 compare
nitrogen source Beta-alanine (N) +0.7 +5.3 compare
nitrogen source Beta-alanine (N) +0.7 +5.5 compare
nitrogen source 6-aminocaproic (N) +0.7 +5.7 compare
nitrogen source 6-aminocaproic (N) +0.9 +6.8 compare
carbon source 5-Aminovaleric 10 mM (C) +1.1 +6.7 compare
carbon source 5-Aminovaleric 10 mM (C) +1.1 +6.2 compare
nitrogen source Propandiamine (N) +1.3 +8.4 compare
carbon source Valerolactam 10 mM (C) +1.9 +12.0 compare
nitrogen source Propandiamine (N) +2.1 +12.3 compare
nitrogen source Caprolactam (N) +2.1 +17.2 compare
nitrogen source Caprolactam (N) +2.2 +19.2 compare
nitrogen source Caprolactam (N) +2.8 +20.0 compare
nitrogen source Caprolactam (N) +2.8 +20.7 compare