Fitness data for PP_5252 in Pseudomonas putida KT2440

conserved exported protein of unknown function
SEED: Exoenzymes regulatory protein AepA precursor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Glucose (C); with MOPS -0.5 -2.5 compare
nitrogen source 2,6-diaminopimelic (N) -0.5 -2.2 compare
temperature shift Temperature shift 30_to_25 -0.5 -2.4 compare
carbon source Crotonic (C) -0.5 -2.6 compare
temperature Growth at 30C; with MOPS -0.4 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.0 compare
temperature shift Temperature shift 10_to_30 -0.4 -2.6 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.4 -1.6 compare
nitrogen source nitrate (N) -0.3 -1.4 compare
pH Growth at pH6 and (C) D-Glucose -0.3 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.3 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.0 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.4 +1.8 compare
carbon source L-Phenylalanine 5 mM (C) +0.4 +2.7 compare
nitrogen source Propiolactam (N) +0.4 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.9 compare