Fitness data for PP_5242 in Pseudomonas putida KT2440

Sensor histidine kinase/GAF domain protein
SEED: Sensor histidine kinase/GAF domain protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
phage P. putida Sci Big MOI 0.1 -0.4 -2.3 compare
phage P. putida Sci small MOI 0.1 -0.4 -1.9 compare
phage P. put South MOI 10 -0.3 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.3 -2.1 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.3 -1.7 compare
carbon source Nonanoic (C) -0.3 -1.7 compare
carbon source L-Phenylalanine 5 mM (C) -0.3 -1.8 compare
temperature Growth at 30C; with MOPS -0.3 -1.4 compare
no stress control Growth with no stress -0.2 -1.5 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.2 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.2 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.2 +1.6 compare
pH pH 7 +0.3 +1.5 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.3 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.3 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +2.1 compare
nitrogen source D-2-Aminobutyric (N) +0.4 +2.2 compare