Fitness data for PP_5223 in Pseudomonas putida KT2440

regulator of nucleotide diphosphokinase
SEED: Regulator of nucleoside diphosphate kinase
KEGG: regulator of nucleoside diphosphate kinase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
nitrogen source Urea (N) -1.3 -2.4 compare
temperature shift Temperature shift 30_to_4 -1.3 -4.2 compare
temperature shift Temperature shift 30_to_34; with MOPS -1.2 -2.7 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -1.2 -2.7 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -1.2 -2.4 compare
nitrogen source nitrogen source nitrite 1mM -1.1 -2.3 compare
pH Growth at pH8 and (C) D-Glucose -1.1 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -1.7 compare
lb LB -1.0 -4.3 compare
carbon source carbon source 4-vinylphenol 0.01 mM -1.0 -2.3 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -1.0 -3.0 compare
phage P. putida PUT10 MOI 10 -1.0 -4.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.9 -1.4 compare
temperature shift Temperature shift 30_to_21; with MOPS +0.8 +2.1 compare
temperature shift Temperature shift 10_to_30 +0.9 +3.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.9 +2.7 compare
carbon source a-Ketoglutaric (C) +0.9 +3.6 compare
nitrogen source D-2-Aminobutyric (N) +0.9 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.9 +2.6 compare
carbon source ferulate (C); with MOPS +1.3 +3.5 compare