Fitness data for PP_5221 in Pseudomonas putida KT2440

conserved protein of unknown function, UPF0178 family
SEED: probable P23 protein
KEGG: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -2.4 -1.5 compare
nitrogen source nitrite (N) -1.9 -3.4 compare
nitrogen source D-2-Aminobutyric (N) -1.6 -1.6 compare
phage PUT 8 MOI 1 -1.4 -1.0 compare
temperature shift Temperature shift 30_to_21; with MOPS -1.4 -1.8 compare
stress R2A with Fusaric 240 ug/mL -1.3 -1.8 compare
supernatant Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x -1.3 -2.8 compare
carbon source ferulate (C); with MOPS -1.3 -2.2 compare
r2a control R2A control -1.2 -3.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.2 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -1.1 compare
carbon source acetate (C) -1.2 -1.6 compare
phage P. putida Sci Big MOI 0.1 -1.1 -1.8 compare
pH Growth at pH9 and (C) Trisodium citrate -1.1 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.1 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.2 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.6 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.8 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +2.8 +1.4 compare