Fitness data for PP_5218 in Pseudomonas putida KT2440

DedA family protein
SEED: FIG139438: lipoprotein B

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -4.8 -7.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -3.9 -7.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -3.1 -6.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -2.4 -2.7 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.2 -4.5 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.1 -4.4 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.9 -4.5 compare
pH Growth at pH6 and (C) D-Glucose -1.9 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.4 -2.9 compare
pH Growth at pH7 and (C) D-Glucose -1.1 -1.7 compare
phage PUT8 MOI 0.1 -1.0 -2.8 compare
carbon source D-Lysine 10 mM (C) -1.0 -3.7 compare
temperature Growth at 25C +1.2 +3.9 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +1.2 +2.8 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 +1.8 +6.9 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 +1.9 +8.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.9 +2.2 compare
micoeukaryotes C.elegans, mixed culture-1 +2.0 +11.6 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +2.1 +9.2 compare
micoeukaryotes C.elegans, mixed culture-2 +2.1 +7.2 compare