Fitness data for PP_5208 in Pseudomonas putida KT2440

putative translation related protein
SEED: ABC-type multidrug transport system, permease component
KEGG: antibiotic transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.6 -1.6 compare
pH Growth at pH8 and (C) D-Glucose -0.5 -1.6 compare
no stress control Growth with no stress -0.5 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -2.2 compare
carbon source L-Proline (C) -0.5 -1.9 compare
carbon source Crotonic (C) -0.5 -1.8 compare
carbon source L-Leucine (C) -0.4 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -2.1 compare
temperature Growth at 10C -0.4 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.4 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.5 compare
nitrogen source nitrite (N) +0.4 +1.6 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.4 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +1.8 compare
pH pH 5 +0.5 +2.3 compare
carbon source Lignin Monomers (C) +0.5 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.5 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.7 compare
phage P. putida Sci small MOI 0.1 +0.6 +2.2 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.8 +2.2 compare