Fitness data for PP_5207 in Pseudomonas putida KT2440

ribosome-associated ATPase
SEED: ABC-type multidrug transport system, permease component
KEGG: ribosome-dependent ATPase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
pH Growth at pH6 and (C) Trisodium citrate -0.5 -2.3 compare
carbon source Vanillin (C) -0.3 -2.2 compare
pH Growth at pH8 and (C) D-Glucose -0.3 -1.5 compare
carbon source 3-Hydroxydecanoic (C) +0.3 +1.7 compare
pH D-Glucose (C) pH 7.5 +0.3 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.8 compare
carbon source ferulate (C); with MOPS +0.3 +1.4 compare
carbon source DL-3-Hydroxyisobutyric (C) +0.3 +2.2 compare
phage P. putida Sci small MOI 0.1 +0.3 +1.6 compare
carbon source L-tyrosine 5 mM (C) +0.3 +2.2 compare
temperature shift Temperature shift 10_to_30; with MOPS +0.3 +2.1 compare
nitrogen source NAG (N); with MOPS +0.3 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +1.6 compare
supernatant Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x and Ferric chloride 1 uM +0.4 +2.2 compare
stress R2A with Fusaric 480 ug/mL +0.4 +2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.4 +2.5 compare
nitrogen source no extra (N); with MOPS +0.5 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.5 +2.5 compare
nitrogen source 2,6-diaminopimelic (N) +0.6 +2.3 compare