Fitness data for PP_5174 in Pseudomonas putida KT2440

Efflux membrane fusion protein, RND family
SEED: Efflux membrane fusion protein, RND family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
temperature shift Temperature shift 10_to_34; with MOPS -0.7 -2.0 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.7 -2.3 compare
nitrogen source no extra (N); with MOPS -0.7 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -1.4 compare
stress Growth with Chloride 200 mM; with MOPS -0.7 -1.5 compare
temperature Growth at 10C; with MOPS -0.6 -2.8 compare
carbon source D-Fructose (C) -0.6 -2.5 compare
pH pH 5 -0.6 -1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -1.3 compare
nitrogen source nitrogen source nitrite 0.5mM +0.6 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +2.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6 +1.5 compare
pH Growth at pH6 and (C) D-Glucose +0.6 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.2 compare
temperature Growth at 30C; with MOPS +0.6 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +2.2 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM +0.7 +2.9 compare
pH Growth at pH7 and (C) Trisodium citrate +0.7 +1.9 compare
carbon source ferulate (C); with MOPS +0.7 +2.4 compare
carbon source Delta-Nonalactone (C) +0.8 +3.6 compare