Fitness data for PP_5167 in Pseudomonas putida KT2440

conserved hypothetical protein
SEED: FIG00953394: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
carbon source butyrate (C) -1.7 -1.7 compare
nitrogen source 2,6-diaminopimelic (N) -1.5 -1.7 compare
pH Growth at pH6 and (C) Trisodium citrate -1.4 -1.3 compare
pH Growth at pH6 and (C) D-Glucose -1.4 -1.2 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -1.3 -2.3 compare
nitrogen source nitrogen source nitrite 0.5mM -1.1 -1.5 compare
carbon source acetate (C) -1.1 -1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -2.2 compare
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -1.0 -1.6 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO. -1.0 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.0 -1.8 compare
carbon source Lauric (C) -1.0 -1.6 compare
r2a control R2A control -1.0 -2.0 compare
pH pH 9 +1.0 +1.8 compare
carbon source Glutaric (C) +1.0 +3.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.9 compare
carbon source D-Glucaric (C) +1.0 +3.5 compare
carbon source ferulate (C); with MOPS +1.2 +1.5 compare
phage P. putida PUT 7 MOI 1 +1.2 +2.2 compare
nitrogen source NAG (N); with MOPS +1.5 +2.4 compare