Fitness data for PP_5166 in Pseudomonas putida KT2440

Sigma-54 dependent transcriptional regulator
SEED: Functional role page for Anaerobic nitric oxide reductase transcription regulator NorR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.9 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7 -2.0 compare
phage P. putida South MOI 10 -0.7 -2.6 compare
carbon source 5-Aminovaleric 10 mM (C) -0.7 -2.3 compare
carbon source Crotonic (C) -0.7 -2.1 compare
nitrogen source NAG (N); with MOPS -0.6 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.6 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.6 +1.9 compare
pH pH 7 +0.6 +1.8 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.6 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.5 compare
pH pH 4 +0.7 +1.7 compare
nitrogen source nitrite (N) +0.7 +2.2 compare
carbon source carbon source Bisabolene 48.9 mM +0.8 +3.1 compare
pH pH 5 +0.9 +2.6 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM +0.9 +2.6 compare
pH pH 8 +0.9 +2.8 compare
carbon source carbon source 4-vinylphenol 0.01 mM +1.0 +2.9 compare
pH pH 9 +1.3 +4.4 compare