Fitness data for PP_5140 in Pseudomonas putida KT2440

Transcriptional regulator, MerR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
pH Growth at pH7 and (C) D-Glucose -4.0 -3.1 compare
micoeukaryotes C.elegans, mixed culture-2 -3.0 -3.5 compare
micoeukaryotes C.elegans, mixed culture-1 -2.8 -3.5 compare
supernatant LB 0.1x with 55.5 mM D-Glucose with Supernatant: Acinetobacter -2.6 -3.4 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose -2.6 -2.5 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -1.9 -2.8 compare
carbon source carbon source 4-vinylphenol 0.1 mM -1.7 -2.5 compare
pH LB 0.1x with 55.5 mM D-Glucose; pH 4.6 -1.6 -3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.5 -2.3 compare
nitrogen source D-2-Aminobutyric (N) -1.4 -1.2 compare
carbon source Crotonic (C) -1.4 -2.0 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO. -1.3 -2.5 compare
nitrogen source NAG (N); with MOPS -1.3 -1.3 compare
phage P. putida Sci Big MOI 0.1 -1.3 -1.5 compare
phage P. putida Sci small MOI 0.1 -1.2 -1.1 compare
pH D-Glucose (C) pH 6 +1.2 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.3 +1.7 compare
stress Growth with Chloride 500 mM; with MOPS +1.3 +3.5 compare
nitrogen source Propandiamine (N) +1.6 +3.5 compare
pH Valerolactone (C) pH 6.5 +1.6 +3.0 compare