Fitness data for PP_5131 in Pseudomonas putida KT2440

sodium-cystine symporter
SEED: L-cystine uptake protein TcyP

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)

group	condition	fitness	t score
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.7	-1.4	compare
phage	P. putida PUT10 MOI 1	-0.6	-3.0	compare
stress	Growth with Chloride 500 mM; with MOPS	-0.6	-2.0	compare
nitrogen source	Propandiamine (N)	-0.6	-2.0	compare
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5	-1.6	compare
pH	Growth at pH6 and (C) Trisodium citrate	-0.5	-1.8	compare
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5	-2.2	compare
carbon source	BC Lignin Sorghum 20 vol% (C)	+0.5	+3.0	compare
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.5	+2.1	compare
carbon source	carbon source Glycerol 108.6 mM	+0.6	+1.9	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	+0.6	+2.0	compare
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay	+0.6	+2.6	compare
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.6	+2.3	compare
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6	+1.6	compare
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6	+1.1	compare
carbon source	carbon source 2-Deoxy-D-glucose 50 mM	+0.6	+2.3	compare
nitrogen source	nitrogen source nitrite 1mM	+0.7	+2.3	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.8	+1.5	compare
carbon source	4-Aminobutyric 10 mM (C)	+0.8	+4.2	compare
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9	+1.6	compare