Fitness data for PP_5122 in Pseudomonas putida KT2440

Oxidoreductase, GMC family
SEED: FIG022869: Oxidoreductase, GMC family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay -0.5 -2.9 compare
pH Growth at pH6 and (C) Trisodium citrate -0.4 -2.0 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -1.8 compare
stress R2A with Fusaric 240 ug/mL -0.4 -2.3 compare
carbon source ferulate (C); with MOPS -0.4 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.6 compare
carbon source Nonanoic (C) -0.4 -2.1 compare
phage P. putida Missley MOI 0.1 -0.3 -1.5 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.3 -1.7 compare
carbon source ferulate (C); with MOPS -0.3 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.3 +1.6 compare
r2a control R2A control +0.3 +2.2 compare
no stress control Growth with no stress +0.3 +2.0 compare
nitrogen source D-2-Aminobutyric (N) +0.3 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.5 compare
nitrogen source D-2-Aminobutyric (N) +0.5 +2.1 compare
pH Growth at pH7 and (C) D-Glucose +0.5 +2.4 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.5 compare