Fitness data for PP_5119 in Pseudomonas putida KT2440

Transcriptional regulator, TetR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7 -1.7 compare
pH Growth at pH8 and (C) Trisodium citrate -0.7 -2.4 compare
nitrogen source nitrogen source nitrite 1mM -0.6 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -2.4 compare
carbon source ferulate (C); with MOPS -0.6 -2.1 compare
carbon source D-Glucose (C) 10 mM -0.5 -2.5 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.5 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -1.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -1.9 compare
carbon source carbon source Bisabolene 48.9 mM -0.5 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5 +2.1 compare
carbon source 3-Hydroxyhexanoic (C) +0.5 +2.6 compare
pH Growth at pH6 and (C) Trisodium citrate +0.5 +1.9 compare
carbon source D-Lysine 10 mM (C) +0.5 +2.8 compare
stress Growth with Chloride 500 mM; with MOPS +0.5 +2.2 compare
carbon source Glutaric (C) +0.6 +2.6 compare
carbon source Hexanoic (C) +0.6 +2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.6 +2.2 compare
nitrogen source D-2-Aminobutyric (N) +0.6 +1.9 compare
carbon source Hexanoic (C) +0.8 +5.0 compare