Fitness data for PP_5115 in Pseudomonas putida KT2440

putative Zinc protease
SEED: FIG146397: peptidase, M16 family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source ferulate (C); with MOPS -0.5 -2.1 compare
pH Growth at pH7 and (C) D-Glucose -0.5 -1.8 compare
temperature Growth at 25C -0.4 -2.0 compare
carbon source Tween 20 (C) -0.4 -1.7 compare
nitrogen source nitrate (N) -0.3 -1.5 compare
lb outgrowth control more dilute start LB outgrowth control more dilute start -0.3 -2.4 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.3 +1.5 compare
nitrogen source NAG (N); with MOPS +0.3 +1.5 compare
nitrogen source Urea (N) +0.3 +2.0 compare
phage P. putida Sci small MOI 0.1 +0.3 +1.7 compare
toxin pUC18_phdP1_pSU18T_docP1 +0.4 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.7 compare
pH Growth at pH9 and (C) Trisodium citrate +0.4 +2.4 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.4 +2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.3 compare
nitrogen source D-2-Aminobutyric (N) +0.6 +2.1 compare