Fitness data for PP_5107 in Pseudomonas putida KT2440

Monofunctional biosynthetic peptidoglycan transglycosylase
SEED: Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)
KEGG: monofunctional biosynthetic peptidoglycan transglycosylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.9 -3.7 compare
pH Growth at pH6 and (C) D-Glucose -1.5 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.4 -1.9 compare
pH D-Glucose (C) pH 6 -1.3 -2.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.2 -4.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.2 -2.2 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -1.1 -1.9 compare
stress Growth with Chloride 500 mM; with MOPS -1.1 -1.9 compare
carbon source Crotonic (C) -1.0 -2.1 compare
nitrogen source Propiolactam (N) -1.0 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.9 -1.9 compare
carbon source DL-3-Hydroxybutyric (C) -0.9 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.9 -3.1 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.8 -1.5 compare
carbon source 3-Hydroxydecanoic (C) +0.8 +2.8 compare
carbon source Beta-alanine (C) +0.8 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.9 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM +0.8 +3.2 compare
carbon source L-Phenylalanine 5 mM (C) +0.9 +2.4 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.9 +1.2 compare