Fitness data for PP_5096 in Pseudomonas putida KT2440

putative factor involved in shape determination
SEED: Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock)
KEGG: YggT family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
nitrogen source spermidine (N) -5.2 -9.4 compare
nitrogen source spermidine (N) -5.1 -9.2 compare
nitrogen source Propandiamine (N) -5.0 -6.0 compare
nitrogen source Propandiamine (N) -4.2 -7.7 compare
carbon source 2,3-Butanediol (C) -1.6 -4.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.4 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.4 -4.5 compare
carbon source Delta-Nonalactone (C) -1.1 -3.4 compare
carbon source D-Glucuronic gamma lactone (C) -1.1 -4.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.1 -1.7 compare
pH Growth at pH8 and (C) D-Glucose -1.0 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -3.4 compare
carbon source L-Alanine (C) -0.8 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -2.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -2.0 compare
carbon source L-Glutamic (C) -0.7 -2.6 compare
phage P. put PUT 10 MOI 10 -0.7 -2.7 compare
temperature Growth at 25C +0.8 +1.8 compare
nitrogen source DL-2-Aminobutyric (N) +0.8 +5.1 compare