Fitness data for PP_5083 in Pseudomonas putida KT2440

putative Type IV pili biogenesis protein PilM
SEED: Type IV pilus biogenesis protein PilM
KEGG: type IV pilus assembly protein PilM

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)

group	condition	fitness	t score
temperature shift	Temperature shift 10_to_25; with MOPS	-2.4	-1.6	compare
phage	P. putida Missley MOI 0.1	-2.2	-2.5	compare
phage	P. putida Sci Big MOI 0.1	-2.2	-3.0	compare
carbon source	carbon source 3-O-methyl-glucose 10 mM	-1.6	-2.5	compare
carbon source	carbon source 4-vinylphenol 0.01 mM	-1.4	-1.9	compare
phage	P. putida South MOI 10	-1.4	-0.9	compare
carbon source	carbon source D-Glucose 55.5 mM	-1.3	-2.2	compare
nitrogen source	NAG (N); with MOPS	-1.3	-0.7	compare
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-1.3	-2.4	compare
carbon source	D-Glucose (C); with MOPS	-1.2	-2.5	compare
nitrogen source	D-2-Aminobutyric (N)	-1.2	-1.1	compare
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.2	-2.5	compare
pH	Growth at pH9 and (C) D-Glucose	-1.2	-2.9	compare
pH	Growth at pH7 and (C) D-Glucose	-1.1	-1.8	compare
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM	-1.1	-2.5	compare
carbon source	3-methyl-1-butanol 0.25 vol% (C)	-1.1	-1.6	compare
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay	-1.0	-2.4	compare
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.2	+1.5	compare
micoeukaryotes	Tetrahymena sp., Mixed culture-2	+1.3	+2.5	compare
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.3	+2.3	compare