Fitness data for PP_5082 in Pseudomonas putida KT2440

Type IV pili biogenesis protein PilN
SEED: Type IV pilus biogenesis protein PilN
KEGG: type IV pilus assembly protein PilN

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.9 -1.9 compare
nitrogen source 2,6-diaminopimelic (N) -0.9 -2.7 compare
phage P. putida Sci Big MOI 0.1 -0.6 -1.7 compare
carbon source Tween 20 (C) -0.6 -1.6 compare
carbon source L-Leucine (C) -0.5 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -2.1 compare
phage P. putida PUT10 MOI 0.1 -0.5 -3.0 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.4 compare
carbon source Valerolactone (C) -0.4 -1.4 compare
pH Growth at pH7 and (C) D-Glucose -0.4 -1.5 compare
phage P. put South MOI 10 -0.4 -1.5 compare
carbon source Tween 20 (C) -0.4 -1.6 compare
carbon source L-Lysine (C) +0.4 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.3 compare
carbon source D-Glucose (C); with MOPS +0.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.1 compare
carbon source ferulate (C); with MOPS +0.5 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.6 compare