Fitness data for PP_5069 in Pseudomonas putida KT2440

Thioredoxin 2
SEED: Thioredoxin
KEGG: thioredoxin 2

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.2 -2.8 compare
pH Growth at pH7 and (C) D-Glucose -1.0 -1.2 compare
attachment on pdms attachment on PDMS; 2 hours -0.9 -3.5 compare
carbon source carbon source D-Glucose 55.5 mM -0.7 -1.6 compare
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -0.7 -2.5 compare
carbon source Trisodium citrate (C) -0.6 -1.4 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM -0.6 -2.1 compare
no stress control Growth with no stress -0.6 -2.0 compare
temperature Growth at 34C -0.6 -1.9 compare
nitrogen source no extra (N); with MOPS -0.6 -1.6 compare
nitrogen source NAG (N); with MOPS -0.6 -0.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -0.9 compare
temperature shift Temperature shift 30_to_10 -0.6 -2.9 compare
pH pH 5 -0.6 -1.2 compare
pH Growth at pH6 and (C) Trisodium citrate +0.6 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.6 compare
pH Valerolactone (C) pH 6.5 +0.6 +2.3 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.6 +1.6 compare
nitrogen source nitrogen source nitrite 0.5mM +0.7 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.8 +2.3 compare