Fitness data for PP_5045 in Pseudomonas putida KT2440

tRNA sulfurtransferase
KEGG: thiamine biosynthesis protein ThiI

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.0)


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group condition fitness t score  
micoeukaryotes Acanthamoeba sp., muxed culture-1 -3.4 -7.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -3.1 -3.0 compare
stress Geraniol 1 vol% -2.6 -3.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -2.3 -3.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.3 -3.5 compare
nitrogen source D-2-Aminobutyric (N) -2.2 -4.2 compare
phage PUT8 MOI 0.1 -2.2 -5.2 compare
nitrogen source DL-2-Aminobutyric (N) -2.1 -4.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -2.1 -4.2 compare
stress Growth with Chloride 500 mM; with MOPS -2.1 -3.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.1 -4.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.1 -2.5 compare
carbon source Vanillin (C) -2.0 -4.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -2.0 -4.2 compare
carbon source Delta-Dodecalactone (C) +2.0 +6.9 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +2.1 +3.4 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +2.1 +3.2 compare
carbon source Delta-Dodecalactone (C) +2.2 +10.7 compare
nitrogen source L-Methionine (N) +2.2 +10.7 compare
nitrogen source L-Methionine (N) +2.5 +11.7 compare