Fitness data for PP_5043 in Pseudomonas putida KT2440

putative PhoPQ-activated pathogenicity-related protein
SEED: PhoP/Q-regulated protein PqaA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -0.4 -1.7 compare
no stress control Growth with no stress -0.4 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -1.7 compare
nitrogen source nitrate (N) -0.3 -1.8 compare
carbon source Delta-Decalactone (C) +0.3 +2.0 compare
temperature Growth at 30C +0.3 +2.0 compare
micoeukaryotes C.elegans, mixed culture-2 +0.3 +1.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.3 +1.5 compare
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL +0.3 +2.3 compare
nitrogen source nitrate (N) +0.3 +1.9 compare
temperature Growth at 34C +0.3 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.3 +1.6 compare
nitrogen source D-2-Aminobutyric (N) +0.3 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.0 compare
carbon source ferulate (C); with MOPS +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.4 +2.2 compare
phage P. putida PUT 7 MOI 1 +0.5 +3.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +3.1 compare