Fitness data for PP_5036 in Pseudomonas putida KT2440

probable formiminoglutamate deiminase
SEED: Formiminoglutamic iminohydrolase (EC 3.5.3.13)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source L-Histidine (C) -5.9 -11.3 compare
nitrogen source L-Histidine (N) -5.4 -11.4 compare
nitrogen source L-Histidine (N) -4.1 -11.6 compare
nitrogen source L-Threonine (N) -0.7 -4.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.7 -3.4 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.7 -2.5 compare
nitrogen source L-Threonine (N) -0.7 -4.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.8 compare
nitrogen source spermidine (N) -0.6 -4.4 compare
carbon source D-Glucose (C); with MOPS -0.6 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -2.6 compare
nitrogen source 2,6-diaminopimelic (N) -0.6 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -3.1 compare
phage P. putida Sci Big MOI 0.1 -0.6 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6 -2.5 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM +0.6 +2.9 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.6 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.7 +3.2 compare
carbon source L-tyrosine 5 mM (C) +0.7 +3.6 compare
nitrogen source NAG (N); with MOPS +0.7 +2.8 compare