Fitness data for PP_4997 in Pseudomonas putida KT2440

pyrimidine operon regulatory protein/uracil phosphoribosyltransferase
SEED: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
KEGG: pyrimidine operon attenuation protein / uracil phosphoribosyltransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.7)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.7 -1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.5 -1.6 compare
phage P. putida South MOI 10 -2.5 -1.8 compare
carbon source ferulate (C); with MOPS -2.3 -1.1 compare
carbon source L-Glutamic (C) -2.2 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -2.2 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -2.2 -2.5 compare
pH pH 4 -2.2 -1.4 compare
carbon source D-Glucose (C); with MOPS -2.2 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -2.1 -1.4 compare
time series Timeseries; MAX condition; Bioreplicate 1; Time 5hrs; Measurement -2.1 -2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.1 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.0 -1.6 compare
temperature Growth at 30C -2.0 -1.7 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM -1.9 -1.9 compare
nitrogen source Hydantoin (N) -1.9 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.9 -1.5 compare
carbon source 5-Hydroxydodecanoate (C) -1.8 -2.1 compare
nitrogen source Propandiamine (N) -1.7 -1.3 compare
nitrogen source D-2-Aminobutyric (N) +2.3 +1.7 compare