Fitness data for PP_4995 in Pseudomonas putida KT2440

putative protein possibly involved in the control of exopolysaccharide production
SEED: UPF0301 protein YqgE
KEGG: putative transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source Tween 20 (C) -1.0 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.9 -3.2 compare
pH Growth at pH7 and (C) Trisodium citrate -0.8 -2.1 compare
phage P. putida PUT 7 MOI 1 -0.8 -2.1 compare
phage P. putida Sci Big MOI 0.1 -0.7 -1.9 compare
carbon source 3-Hydroxydecanoic (C) -0.6 -2.0 compare
phage P. putida Sci small MOI 0.1 -0.6 -1.4 compare
carbon source Myristic (C) -0.6 -1.9 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay -0.6 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -2.2 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay -0.6 -2.6 compare
carbon source D-Glucose (C); with MOPS -0.6 -1.6 compare
temperature shift Temperature shift 10_to_21 +0.6 +2.6 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.6 +2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +3.1 compare
pH Growth at pH7 and (C) Trisodium citrate +0.7 +2.4 compare
nitrogen source nitrite (N) +0.7 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.7 +2.4 compare
carbon source ferulate (C); with MOPS +0.7 +2.2 compare
pH pH 5 +0.7 +2.8 compare