Fitness data for PP_4994 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Ferric siderophore transport system, periplasmic binding protein TonB
KEGG: periplasmic protein TonB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 5.5)


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group condition fitness t score  
stress Growth with Chloride 500 mM -7.4 -5.1 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -7.1 -4.9 compare
pH Growth at pH6 and (C) D-Glucose -7.1 -4.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -6.9 -4.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -6.7 -4.6 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -6.7 -6.5 compare
pH Growth at pH6 and (C) Trisodium citrate -6.5 -6.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -6.4 -4.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -6.4 -4.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -6.3 -4.4 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -6.3 -5.9 compare
pH Growth at pH6 and (C) D-Glucose -6.1 -6.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -6.1 -4.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -6.1 -3.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -6.0 -4.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -5.9 -4.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -5.8 -7.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -5.6 -3.9 compare
stress Growth with Chloride 500 mM; with MOPS -5.5 -8.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -5.5 -5.3 compare