Fitness data for PP_4988 in Pseudomonas putida KT2440

signal transduction histidine kinase CheA/CheY-like receiver
SEED: Signal transduction histidine kinase CheA (EC 2.7.3.-)
KEGG: type IV pili sensor histidine kinase and response regulator; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.3 -6.9 compare
temperature shift Temperature shift 30_to_4 -2.0 -7.7 compare
nitrogen source Urea (N) -1.9 -6.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.9 -6.8 compare
temperature shift Temperature shift 30_to_4; with MOPS -1.8 -7.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.8 -6.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.7 -4.9 compare
pH Growth at pH7 and (C) D-Glucose -1.7 -4.4 compare
nitrogen source NAG (N); with MOPS -1.7 -6.0 compare
carbon source Tween 20 (C) -1.6 -7.0 compare
nitrogen source nitrate (N) -1.6 -5.1 compare
temperature shift Temperature shift 30_to_4 -1.6 -6.2 compare
carbon source D-Glucose (C) -1.5 -4.9 compare
nitrogen source nitrogen source nitrite 0.5mM -1.5 -3.8 compare
temperature shift Temperature shift 30_to_4; with MOPS -1.5 -6.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.4 -5.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.4 -5.3 compare
carbon source DL-2-Aminoadipic 10 mM (C) +1.4 +7.2 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +1.7 +5.9 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +2.1 +8.6 compare