Fitness data for PP_4985 in Pseudomonas putida KT2440

16S rRNA m3U1498 methyltransferase
SEED: Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)
KEGG: ribosomal RNA small subunit methyltransferase E

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
nitrogen source DL-2-Aminobutyric (N) -1.5 -8.6 compare
temperature shift Temperature shift 10_to_25; with MOPS -1.3 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.2 -2.4 compare
phage P. putida PUT 7 MOI 1 -1.1 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -3.4 compare
nitrogen source DL-2-Aminobutyric (N) -1.1 -5.3 compare
nitrogen source Urea (N) -1.0 -2.4 compare
nitrogen source D-2-Aminobutyric (N) -1.0 -2.0 compare
phage P. putida Sci small MOI 0.1 -0.9 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -1.9 compare
carbon source Trisodium citrate (C) -0.8 -1.3 compare
phage PUT 8 MOI 1 +0.8 +2.6 compare
phage P. put PUT 10 MOI 10 +0.9 +5.1 compare
phage P. put PUT 10 MOI 1 +0.9 +4.1 compare
phage P. putida PUT10 MOI 10 +0.9 +4.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.9 +1.4 compare
phage P. put PUT 10 MOI 10 +0.9 +4.8 compare
carbon source ferulate (C); with MOPS +1.0 +2.2 compare
carbon source Delta-Decalactone (C) +1.0 +3.2 compare