Fitness data for PP_4957 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00953367: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
phage P. putida PUT 7 MOI 1 -2.1 -3.3 compare
nitrogen source D-2-Aminobutyric (N) -1.5 -1.3 compare
carbon source Trisodium citrate (C) -1.5 -1.6 compare
carbon source D-Glucose (C); with MOPS -1.3 -1.0 compare
phage P. putida Sci Big MOI 0.1 -1.2 -1.8 compare
temperature shift Temperature shift 30_to_25 -1.2 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.1 -1.9 compare
carbon source L-tyrosine 5 mM (C) -1.0 -2.7 compare
carbon source ferulate (C); with MOPS -1.0 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.0 -2.3 compare
nitrogen source nitrate (N) -0.9 -1.4 compare
temperature Growth at 30C; with MOPS +0.9 +3.4 compare
temperature shift Temperature shift 30_to_34; with MOPS +1.0 +4.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +1.0 +2.0 compare
r2a control R2A control +1.0 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +2.1 compare
temperature Growth at 30C +1.1 +3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +1.1 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +1.4 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant +1.3 +6.1 compare