Fitness data for PP_4953 in Pseudomonas putida KT2440

putative oxidoreductase with FAD/NAD(P)-binding domain
SEED: FIG00953568: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source Valeric (C) -1.8 -2.2 compare
carbon source D-Glucose (C) -1.8 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.6 -2.5 compare
phage P. putida Sci small MOI 0.1 -1.4 -2.7 compare
nitrogen source nitrogen source nitrite 1mM -1.1 -1.8 compare
temperature shift Temperature shift 10_to_25; with MOPS -1.0 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -2.4 compare
nitrogen source nitrate (N) -0.9 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.8 -2.3 compare
temperature shift Temperature shift 30_to_25 -0.7 -2.9 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.7 -2.1 compare
phage P. putida South MOI 10 +0.7 +1.5 compare
phage P. putida Sci small MOI 0.1 +0.7 +1.2 compare
carbon source Valerolactone (C) +0.7 +1.9 compare
carbon source D-Lysine 10 mM (C) +0.7 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.8 +2.2 compare
nitrogen source nitrogen source nitrite 0.5mM +0.8 +2.4 compare
pH Growth at pH6 and (C) Trisodium citrate +0.9 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +2.2 compare
nitrogen source D-2-Aminobutyric (N) +0.9 +1.3 compare