Fitness data for PP_4949 in Pseudomonas putida KT2440

putative peptidase, TldD/PmbA family
SEED: TldD family protein, Beta/Gamma-proteobacterial subgroup

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
nitrogen source Urea (N) -0.8 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.8 -1.8 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.8 -2.1 compare
carbon source 5-Hydroxydodecanoate (C) -0.8 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -3.0 compare
nitrogen source NAG (N) -0.6 -3.3 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.6 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.5 compare
temperature shift Temperature shift 10_to_25 -0.6 -2.8 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.5 -1.9 compare
carbon source D-Glucose (C) +0.6 +2.1 compare
carbon source Nonanoic (C) +0.6 +2.0 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM +0.6 +3.1 compare
nitrogen source Propandiamine (N) +0.6 +2.2 compare
carbon source rac-3-Hydroxypentanoic Acid (C) +0.6 +2.1 compare
carbon source Crotonic (C) +0.6 +2.2 compare
carbon source Rhamnogalacturonan - from potato (C) +0.7 +2.5 compare
carbon source Valerolactone (C) +0.7 +2.3 compare
nitrogen source Caprolactam (N) +0.7 +3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.7 +2.5 compare