Fitness data for PP_4925 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
pH Growth at pH7 and (C) Trisodium citrate -2.6 -3.0 compare
nitrogen source 2,6-diaminopimelic (N) -2.5 -1.7 compare
nitrogen source nitrogen source nitrite 1mM -2.1 -3.2 compare
temperature shift Temperature shift 30_to_21; with MOPS -2.1 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.6 -2.0 compare
temperature shift Temperature shift 10_to_30 -1.3 -2.9 compare
nitrogen source nitrate (N) -1.3 -1.4 compare
stress R2A with Fusaric 480 ug/mL -1.2 -2.5 compare
nitrogen source no extra (N); with MOPS -1.2 -2.4 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +1.1 +2.1 compare
phage P. putida South MOI 0.1 +1.1 +2.7 compare
pH pH 9 +1.1 +2.4 compare
carbon source carbon source Glycerol 108.6 mM +1.1 +3.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +1.6 compare
temperature Growth at 30C; with MOPS +1.2 +3.2 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +1.4 +3.3 compare
pH pH 7 +1.5 +2.3 compare
pH pH 4 +1.5 +3.6 compare
phage PUT 8 MOI 1 +1.8 +3.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.8 +3.1 compare