Fitness data for PP_4891 in Pseudomonas putida KT2440

integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex
SEED: HflC protein
KEGG: membrane protease subunit HflC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.5)


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group condition fitness t score  
phage P. putida South MOI 10 -4.3 -3.0 compare
nitrogen source spermidine (N) -4.0 -2.8 compare
phage P. putida PUT10 MOI 10 -3.7 -7.0 compare
carbon source D-Galacturonic Acid (C) -3.3 -2.3 compare
nitrogen source Propandiamine (N) -3.2 -2.2 compare
nitrogen source L-pyroglutamic (N) -3.2 -5.8 compare
nitrogen source spermidine (N) -3.2 -4.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -3.1 -5.5 compare
carbon source L-Glutamic (C) -3.1 -7.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -3.0 -3.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.9 -5.2 compare
carbon source L-Glutamic (C) -2.8 -4.2 compare
carbon source D-Galacturonic Acid (C) -2.7 -3.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.6 -5.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -2.6 -5.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -2.6 -5.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -2.6 -4.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -2.5 -6.3 compare
carbon source D-Glucuronic gamma lactone (C) -2.5 -4.4 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +2.5 +12.7 compare