Fitness data for PP_4848 in Pseudomonas putida KT2440

Curved DNA-binding protein
SEED: DnaJ-class molecular chaperone CbpA
KEGG: curved DNA-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
temperature shift Temperature shift 30_to_21; with MOPS -2.6 -2.2 compare
pH Growth at pH9 and (C) Trisodium citrate -2.5 -2.6 compare
temperature Growth at 30C; with MOPS -2.1 -1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -2.0 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.9 -1.9 compare
nitrogen source Ammonium chloride (N) -1.8 -1.8 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -1.6 -1.7 compare
phage P. putida Sci small MOI 0.1 -1.6 -1.2 compare
pH Growth at pH7 and (C) D-Glucose -1.6 -1.1 compare
pH Growth at pH6 and (C) Trisodium citrate -1.6 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.6 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.6 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.5 -1.8 compare
stress R2A with Fusaric 240 ug/mL -1.5 -1.9 compare
carbon source Delta-Nonalactone (C) -1.3 -1.8 compare
stress Growth with Chloride 500 mM; with MOPS -1.2 -2.0 compare
nitrogen source nitrogen source nitrite 1mM -1.2 -2.2 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -1.2 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.2 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.5 +2.2 compare