Fitness data for PP_4843 in Pseudomonas putida KT2440

putative Urea ABC transporter, permease protein
SEED: Urea ABC transporter, permease protein UrtC
KEGG: branched-chain amino acid transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.2 -2.7 compare
temperature shift Temperature shift 30_to_25; with MOPS -1.1 -2.4 compare
phage P. putida Sci Big MOI 0.1 -1.0 -1.7 compare
pH Growth at pH7 and (C) D-Glucose -0.8 -1.2 compare
carbon source Tween 20 (C) -0.8 -2.2 compare
stress Butanol 0.6 vol% -0.7 -3.3 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.7 -1.5 compare
carbon source 2,3-Butanediol (C) -0.7 -2.8 compare
nitrogen source 2,6-diaminopimelic (N) -0.6 -1.6 compare
nitrogen source Ammonium chloride (N); with MOPS -0.6 -1.6 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +2.6 compare
nitrogen source no extra (N); with MOPS +0.6 +1.8 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.6 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.6 +1.5 compare
pH pH 9 +0.6 +1.5 compare
pH Growth at pH8 and (C) D-Glucose +0.7 +1.9 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.7 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +2.1 compare
nitrogen source Propandiamine (N) +0.8 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.9 +3.8 compare