Fitness data for PP_4842 in Pseudomonas putida KT2440

putative Urea ABC transporter
SEED: Urea ABC transporter, permease protein UrtB
KEGG: branched-chain amino acid transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
pH Growth at pH7 and (C) Trisodium citrate -0.8 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5 -1.6 compare
nitrogen source Propandiamine (N) -0.5 -2.9 compare
carbon source Acetate Carbon Source (20mM) -0.4 -2.9 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.4 -2.4 compare
carbon source L-Phenylalanine 5 mM (C) -0.4 -2.2 compare
nitrogen source nitrogen source nitrite 0.5mM -0.4 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.4 -1.8 compare
carbon source Phenylacetic (C) -0.4 -2.4 compare
nitrogen source Ammonium chloride (N) -0.4 -1.5 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.4 -1.6 compare
nitrogen source Propandiamine (N) -0.4 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.8 compare
carbon source Myristic (C) +0.4 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +2.2 compare
nitrogen source NAG (N); with MOPS +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.8 compare
carbon source ferulate (C); with MOPS +0.5 +1.8 compare
carbon source L-Valine (C) +0.5 +3.6 compare