Fitness data for PP_4834 in Pseudomonas putida KT2440

SPFH domain/Band 7 family protein
SEED: Putative stomatin/prohibitin-family membrane protease subunit YbbK

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source ferulate (C); with MOPS -0.5 -1.7 compare
phage P. putida PUT 7 MOI 1 -0.5 -1.7 compare
carbon source Nonanoic (C) -0.4 -2.5 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. -0.4 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -1.8 compare
nitrogen source Caprolactam (N) +0.4 +2.3 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL +0.4 +2.4 compare
pH Growth at pH8 and (C) D-Glucose +0.4 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +1.6 compare
stress Butanol 0.6 vol% +0.4 +2.3 compare
nitrogen source NAG (N) +0.4 +2.6 compare
nitrogen source Ammonium chloride (N) +0.4 +1.9 compare
carbon source 3-Hydroxydecanoic (C) +0.4 +2.3 compare
nitrogen source no extra (N) +0.4 +2.7 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.4 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.7 compare
temperature Growth at 25C +0.4 +2.0 compare
nitrogen source nitrogen source nitrate 5mM +0.5 +2.5 compare
pH Growth at pH9 and (C) Trisodium citrate +0.5 +2.0 compare