Fitness data for PP_4808 in Pseudomonas putida KT2440

23S rRNA m3psi1915 methyltransferase
SEED: LSU m3Psi1915 methyltransferase RlmH
KEGG: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
phage PUT 8 MOI 1 -7.6 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -4.9 -2.6 compare
nitrogen source nitrate (N) -3.6 -2.1 compare
nitrogen source Hydantoin (N) -2.5 -3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.3 -1.9 compare
pH Growth at pH9 and (C) Trisodium citrate -2.1 -1.4 compare
phage P. put South MOI 10 -2.1 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.9 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.8 -1.5 compare
carbon source Myristic (C) -1.7 -1.9 compare
no stress control Growth with no stress -1.6 -1.4 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -1.6 -2.9 compare
attachment on pdms attachment on PDMS; 2 hours -1.6 -1.9 compare
nitrogen source Ammonium chloride (N) -1.5 -0.8 compare
pH Growth at pH7 and (C) D-Glucose -1.5 -0.9 compare
nitrogen source NAG (N); with MOPS +1.5 +1.7 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM +1.5 +1.7 compare
nitrogen source D-2-Aminobutyric (N) +1.5 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.6 +1.6 compare