Fitness data for PP_4751 in Pseudomonas putida KT2440

Amino acid ABC transporter, ATP-binding protein
SEED: Glutamate transport ATP-binding protein
KEGG: polar amino acid transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.9 -1.5 compare
pH Growth at pH6 and (C) D-Glucose -0.8 -1.8 compare
carbon source Tween 20 (C) -0.7 -1.7 compare
stress R2A with Fusaric 240 ug/mL -0.7 -1.9 compare
temperature shift Temperature shift 10_to_30 -0.7 -2.9 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.5 compare
nitrogen source Urea (N) -0.6 -1.7 compare
nitrogen source Urea (N) -0.6 -2.1 compare
phage P. putida Sci small MOI 0.1 -0.6 -1.4 compare
carbon source acetate (C) -0.6 -1.1 compare
nitrogen source NAG (N); with MOPS -0.6 -0.9 compare
carbon source Vanillin (C) -0.6 -2.5 compare
carbon source D-Glucuronic gamma lactone (C) +0.6 +3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.6 +2.1 compare
pH Growth at pH6 and (C) Trisodium citrate +0.6 +1.8 compare
phage P. put South MOI 10 +0.6 +2.8 compare
nitrogen source 2,6-diaminopimelic (N) +0.7 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.7 +1.8 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.7 +2.1 compare